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Decoding Neuronal Networks: A Reservoir Computing Approach for Predicting Connectivity and Functionality

Quantitative Methods 2025-02-14 v3 Machine Learning Signal Processing Biological Physics Computational Physics

Abstract

In this study, we address the challenge of analyzing electrophysiological measurements in neuronal networks. Our computational model, based on the Reservoir Computing Network (RCN) architecture, deciphers spatio-temporal data obtained from electrophysiological measurements of neuronal cultures. By reconstructing the network structure on a macroscopic scale, we reveal the connectivity between neuronal units. Notably, our model outperforms common methods like Cross-Correlation and Transfer-Entropy in predicting the network's connectivity map. Furthermore, we experimentally validate its ability to forecast network responses to specific inputs, including localized optogenetic stimuli.

Keywords

Cite

@article{arxiv.2311.03131,
  title  = {Decoding Neuronal Networks: A Reservoir Computing Approach for Predicting Connectivity and Functionality},
  author = {Ilya Auslender and Giorgio Letti and Yasaman Heydari and Clara Zaccaria and Lorenzo Pavesi},
  journal= {arXiv preprint arXiv:2311.03131},
  year   = {2025}
}

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R2 v1 2026-06-28T13:12:42.645Z