English

De novo Drug Design using Reinforcement Learning with Multiple GPT Agents

Biomolecules 2024-01-15 v1 Computational Engineering, Finance, and Science Machine Learning

Abstract

De novo drug design is a pivotal issue in pharmacology and a new area of focus in AI for science research. A central challenge in this field is to generate molecules with specific properties while also producing a wide range of diverse candidates. Although advanced technologies such as transformer models and reinforcement learning have been applied in drug design, their potential has not been fully realized. Therefore, we propose MolRL-MGPT, a reinforcement learning algorithm with multiple GPT agents for drug molecular generation. To promote molecular diversity, we encourage the agents to collaborate in searching for desirable molecules in diverse directions. Our algorithm has shown promising results on the GuacaMol benchmark and exhibits efficacy in designing inhibitors against SARS-CoV-2 protein targets. The codes are available at: https://github.com/HXYfighter/MolRL-MGPT.

Keywords

Cite

@article{arxiv.2401.06155,
  title  = {De novo Drug Design using Reinforcement Learning with Multiple GPT Agents},
  author = {Xiuyuan Hu and Guoqing Liu and Yang Zhao and Hao Zhang},
  journal= {arXiv preprint arXiv:2401.06155},
  year   = {2024}
}

Comments

Accepted by NeurIPS 2023

R2 v1 2026-06-28T14:14:37.639Z