CSA: Comprehensive comparison of pairwise protein structure alignments
Quantitative Methods
2012-02-14 v1
Abstract
CSA is a web server for the comprehensive comparison of pairwise protein structure alignments. Its exact alignment engine computes either optimal, top-scoring alignments or heuristic alignments with quality guarantee for the inter-residue distance based scorings of contact map overlap, PAUL, DALI and MATRAS. These and additional, uploaded alignments are compared using a number of quality measures and intuitive visualizations. CSA brings new insight into the structural relationship of the protein pairs under investigation and is a valuable tool for studying structural similarities. It is available at http://csa.project.cwi.nl
Keywords
Cite
@article{arxiv.1202.2670,
title = {CSA: Comprehensive comparison of pairwise protein structure alignments},
author = {Inken Wohlers and Noël Malod-Dognin and Rumen Andonov and Gunnar W. Klau},
journal= {arXiv preprint arXiv:1202.2670},
year = {2012}
}
Comments
Preprint, submitted to Nucleic Acids Research