English

Computing Entropies With Nested Sampling

Computation 2017-10-11 v2 Instrumentation and Methods for Astrophysics Information Theory math.IT Data Analysis, Statistics and Probability

Abstract

The Shannon entropy, and related quantities such as mutual information, can be used to quantify uncertainty and relevance. However, in practice, it can be difficult to compute these quantities for arbitrary probability distributions, particularly if the probability mass functions or densities cannot be evaluated. This paper introduces a computational approach, based on Nested Sampling, to evaluate entropies of probability distributions that can only be sampled. I demonstrate the method on three examples: a simple gaussian example where the key quantities are available analytically; (ii) an experimental design example about scheduling observations in order to measure the period of an oscillating signal; and (iii) predicting the future from the past in a heavy-tailed scenario.

Keywords

Cite

@article{arxiv.1707.03543,
  title  = {Computing Entropies With Nested Sampling},
  author = {Brendon J. Brewer},
  journal= {arXiv preprint arXiv:1707.03543},
  year   = {2017}
}

Comments

Accepted for publication in Entropy. 21 pages, 3 figures. Software available at https://github.com/eggplantbren/InfoNest