English

Chem4DLLM: 4D Multimodal LLMs for Chemical Dynamics Understanding

Machine Learning 2026-03-13 v1 Computation and Language

Abstract

Existing chemical understanding tasks primarily rely on static molecular representations, limiting their ability to model inherently dynamic phenomena such as bond breaking or conformational changes, which are essential for a chemist to understand chemical reactions. To address this gap, we introduce Chemical Dynamics Understanding (ChemDU), a new task that translates 4D molecular trajectories into interpretable natural-language explanations. ChemDU focuses on fundamental dynamic scenarios, including gas-phase and catalytic reactions, and requires models to reason about key events along molecular trajectories, such as bond formation and dissociation, and to generate coherent, mechanistically grounded narratives. To benchmark this capability, we construct Chem4DBench, the first dataset pairing 4D molecular trajectories with expert-authored explanations across these settings. We further propose Chem4DLLM, a unified model that integrates an equivariant graph encoder with a pretrained large language model to explicitly capture molecular geometry and rotational dynamics. We hope that ChemDU, together with Chem4DBench and Chem4DLLM, will stimulate further research in dynamic chemical understanding and multimodal scientific reasoning.

Keywords

Cite

@article{arxiv.2603.11924,
  title  = {Chem4DLLM: 4D Multimodal LLMs for Chemical Dynamics Understanding},
  author = {Xinyu Li and Zhen Zhang and Qi Chen and Anton van den Hengel and Lina Yao and Javen Qinfeng Shi},
  journal= {arXiv preprint arXiv:2603.11924},
  year   = {2026}
}

Comments

18 pages

R2 v1 2026-07-01T11:16:42.845Z