English

BraTS-Path Challenge: Assessing Heterogeneous Histopathologic Brain Tumor Sub-regions

Computer Vision and Pattern Recognition 2024-05-20 v1

Abstract

Glioblastoma is the most common primary adult brain tumor, with a grim prognosis - median survival of 12-18 months following treatment, and 4 months otherwise. Glioblastoma is widely infiltrative in the cerebral hemispheres and well-defined by heterogeneous molecular and micro-environmental histopathologic profiles, which pose a major obstacle in treatment. Correctly diagnosing these tumors and assessing their heterogeneity is crucial for choosing the precise treatment and potentially enhancing patient survival rates. In the gold-standard histopathology-based approach to tumor diagnosis, detecting various morpho-pathological features of distinct histology throughout digitized tissue sections is crucial. Such "features" include the presence of cellular tumor, geographic necrosis, pseudopalisading necrosis, areas abundant in microvascular proliferation, infiltration into the cortex, wide extension in subcortical white matter, leptomeningeal infiltration, regions dense with macrophages, and the presence of perivascular or scattered lymphocytes. With these features in mind and building upon the main aim of the BraTS Cluster of Challenges https://www.synapse.org/brats2024, the goal of the BraTS-Path challenge is to provide a systematically prepared comprehensive dataset and a benchmarking environment to develop and fairly compare deep-learning models capable of identifying tumor sub-regions of distinct histologic profile. These models aim to further our understanding of the disease and assist in the diagnosis and grading of conditions in a consistent manner.

Cite

@article{arxiv.2405.10871,
  title  = {BraTS-Path Challenge: Assessing Heterogeneous Histopathologic Brain Tumor Sub-regions},
  author = {Spyridon Bakas and Siddhesh P. Thakur and Shahriar Faghani and Mana Moassefi and Ujjwal Baid and Verena Chung and Sarthak Pati and Shubham Innani and Bhakti Baheti and Jake Albrecht and Alexandros Karargyris and Hasan Kassem and MacLean P. Nasrallah and Jared T. Ahrendsen and Valeria Barresi and Maria A. Gubbiotti and Giselle Y. López and Calixto-Hope G. Lucas and Michael L. Miller and Lee A. D. Cooper and Jason T. Huse and William R. Bell},
  journal= {arXiv preprint arXiv:2405.10871},
  year   = {2024}
}
R2 v1 2026-06-28T16:30:57.942Z