Benchmarking with MIMIC-IV, an irregular, spare clinical time series dataset

Hung Bui; Harikrishna Warrier; Yogesh Gupta

Benchmarking with MIMIC-IV, an irregular, spare clinical time series dataset

Machine Learning 2024-01-30 v1

Authors: Hung Bui , Harikrishna Warrier , Yogesh Gupta

Abstract

Electronic health record (EHR) is more and more popular, and it comes with applying machine learning solutions to resolve various problems in the domain. This growing research area also raises the need for EHRs accessibility. Medical Information Mart for Intensive Care (MIMIC) dataset is a popular, public, and free EHR dataset in a raw format that has been used in numerous studies. However, despite of its popularity, it is lacking benchmarking work, especially with recent state of the art works in the field of deep learning with time-series tabular data. The aim of this work is to fill this lack by providing a benchmark for latest version of MIMIC dataset, MIMIC-IV. We also give a detailed literature survey about studies that has been already done for MIIMIC-III.

Keywords

MIMIC-IV electronic health records clinical time series benchmarking deep learning tabular data

Cite

@article{arxiv.2401.15290,
  title  = {Benchmarking with MIMIC-IV, an irregular, spare clinical time series dataset},
  author = {Hung Bui and Harikrishna Warrier and Yogesh Gupta},
  journal= {arXiv preprint arXiv:2401.15290},
  year   = {2024}
}

Comments

7 pages, 1 figure, 3 tables

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