English

Automated segmentation of intracranial hemorrhages from 3D CT

Image and Video Processing 2022-09-23 v1 Computer Vision and Pattern Recognition
Authors: Md Mahfuzur Rahman Siddiquee , Dong Yang , Yufan He , Daguang Xu , Andriy Myronenko
View on arXiv ↗ PDF ↗

Abstract

Intracranial hemorrhage segmentation challenge (INSTANCE 2022) offers a platform for researchers to compare their solutions to segmentation of hemorrhage stroke regions from 3D CTs. In this work, we describe our solution to INSTANCE 2022. We use a 2D segmentation network, SegResNet from MONAI, operating slice-wise without resampling. The final submission is an ensemble of 18 models. Our solution (team name NVAUTO) achieves the top place in terms of Dice metric (0.721), and overall rank 2. It is implemented with Auto3DSeg.

Keywords

intracranial hemorrhage 3d ct segmentation segresnet model ensemble instance 2022

Cite

@article{arxiv.2209.10648,
  title  = {Automated segmentation of intracranial hemorrhages from 3D CT},
  author = {Md Mahfuzur Rahman Siddiquee and Dong Yang and Yufan He and Daguang Xu and Andriy Myronenko},
  journal= {arXiv preprint arXiv:2209.10648},
  year   = {2022}
}

Comments

INSTANCE22 challenge report, MICCAI2022. arXiv admin note: substantial text overlap with arXiv:2209.09546

Related papers

View all related →
Image and Video Processing · Electrical Eng. & Systems
The state-of-the-art 3D anisotropic intracranial hemorrhage segmentation on non-contrast head CT: The INSTANCE challenge
Xiangyu Li, Gongning Luo, Kuanquan Wang, Hongyu Wang +30
2023-01-13
Image and Video Processing · Electrical Eng. & Systems
Automated ischemic stroke lesion segmentation from 3D MRI
Md Mahfuzur Rahman Siddique, Dong Yang, Yufan He, Daguang Xu +1
2022-09-22
Image and Video Processing · Electrical Eng. & Systems
Automated head and neck tumor segmentation from 3D PET/CT
Andriy Myronenko, Md Mahfuzur Rahman Siddiquee, Dong Yang, Yufan He +1
2022-09-23
Computer Vision and Pattern Recognition · Computer Science
Accurate and Efficient Intracranial Hemorrhage Detection and Subtype Classification in 3D CT Scans with Convolutional and Long Short-Term Memory Neural Networks
Mihail Burduja, Radu Tudor Ionescu, Nicolae Verga
2020-09-30
Computer Vision and Pattern Recognition · Computer Science
Slice-level Detection of Intracranial Hemorrhage on CT Using Deep Descriptors of Adjacent Slices
Dat T. Ngo, Thao T. B. Nguyen, Hieu T. Nguyen, Dung B. Nguyen +2
2023-04-19
Computer Vision and Pattern Recognition · Computer Science
PatchFCN for Intracranial Hemorrhage Detection
Weicheng Kuo, Christian Häne, Esther Yuh, Pratik Mukherjee +1
2019-04-16
Computer Vision and Pattern Recognition · Computer Science
A CNN-LSTM Architecture for Detection of Intracranial Hemorrhage on CT scans
Nhan T. Nguyen, Dat Q. Tran, Nghia T. Nguyen, Ha Q. Nguyen
2020-06-29
Image and Video Processing · Electrical Eng. & Systems
An Automatic Cascaded Model for Hemorrhagic Stroke Segmentation and Hemorrhagic Volume Estimation
Weijin Xu, Zhuang Sha, Huihua Yang, Rongcai Jiang +3
2024-01-10
Computer Vision and Pattern Recognition · Computer Science
CT Scans As Video: Efficient Intracranial Hemorrhage Detection Using Multi-Object Tracking
Amirreza Parvahan, Mohammad Hoseyni, Javad Khoramdel, Amirhossein Nikoofard
2026-01-07
Image and Video Processing · Electrical Eng. & Systems
A comparative study of 2D image segmentation algorithms for traumatic brain lesions using CT data from the ProTECTIII multicenter clinical trial
Shruti Jadon, Owen P. Leary, Ian Pan, Tyler J. Harder +3
2020-06-04
Image and Video Processing · Electrical Eng. & Systems
Acute ischemic stroke lesion segmentation in non-contrast CT images using 3D convolutional neural networks
A. V. Dobshik, S. K. Verbitskiy, I. A. Pestunov, K. M. Sherman +3
2023-10-31
Image and Video Processing · Electrical Eng. & Systems
Combining CNN and Hybrid Active Contours for Head and Neck Tumor Segmentation in CT and PET images
Jun Ma, Xiaoping Yang
2020-12-29
Computer Vision and Pattern Recognition · Computer Science
An Effective Transformer-based Solution for RSNA Intracranial Hemorrhage Detection Competition
Fangxin Shang, Siqi Wang, Xiaorong Wang, Yehui Yang
2022-06-08
Image and Video Processing · Electrical Eng. & Systems
Aorta Segmentation from 3D CT in MICCAI SEG.A. 2023 Challenge
Andriy Myronenko, Dong Yang, Yufan He, Daguang Xu
2023-10-09
Computer Vision and Pattern Recognition · Computer Science
Multi-Phase Automated Segmentation of Dental Structures in CBCT Using a Lightweight Auto3DSeg and SegResNet Implementation
Dominic LaBella, Keshav Jha, Jared Robbins, Esther Yu
2025-08-19
Image and Video Processing · Electrical Eng. & Systems
A multi view multi stage and multi window framework for pulmonary artery segmentation from CT scans
ZeYu Liu, Yi Wang, Jing Wen, Yong Zhang +3
2022-09-15
Image and Video Processing · Electrical Eng. & Systems
CNN Based Segmentation of Infarcted Regions in Acute Cerebral Stroke Patients From Computed Tomography Perfusion Imaging
Luca Tomasetti, Kjersti Engan, Mahdieh Khanmohammadi, Kathinka Dæhli Kurz
2021-04-22
Image and Video Processing · Electrical Eng. & Systems
Intracranial Hemorrhage Segmentation Using Deep Convolutional Model
Murtadha D. Hssayeni, M. S., Muayad S. Croock, Ph. D. +8
2019-11-18
Image and Video Processing · Electrical Eng. & Systems
Automatic segmentation of kidney and liver tumors in CT images
Dina B. Efremova, Dmitry A. Konovalov, Thanongchai Siriapisith, Worapan Kusakunniran +1
2019-09-18
Image and Video Processing · Electrical Eng. & Systems
Cascaded Convolutional Neural Network for Automatic Myocardial Infarction Segmentation from Delayed-Enhancement Cardiac MRI
Yichi Zhang
2020-12-29
Image and Video Processing · Electrical Eng. & Systems
TSI-Net: A Timing Sequence Image Segmentation Network for Intracranial Artery Segmentation in Digital Subtraction Angiography
Lemeng Wang, Wentao Liu, Weijin Xu, Haoyuan Li +2
2023-09-08
Image and Video Processing · Electrical Eng. & Systems
Automated Brain Tumour Segmentation Using Deep Fully Residual Convolutional Neural Networks
Indrajit Mazumdar
2020-05-13
Computer Vision and Pattern Recognition · Computer Science
Hemorica: A Comprehensive CT Scan Dataset for Automated Brain Hemorrhage Classification, Segmentation, and Detection
Kasra Davoodi, Mohammad Hoseyni, Javad Khoramdel, Reza Barati +4
2025-11-07
Computer Vision and Pattern Recognition · Computer Science
BHSD: A 3D Multi-Class Brain Hemorrhage Segmentation Dataset
Biao Wu, Yutong Xie, Zeyu Zhang, Jinchao Ge +5
2023-08-24
Computer Vision and Pattern Recognition · Computer Science
Intracranial Hemorrhage Detection Using Neural Network Based Methods With Federated Learning
Utkarsh Chandra Srivastava, Anshuman Singh, K. Sree Kumar
2024-09-05