Learning universal representations from electroencephalogram (EEG) signals is a cutting-edge approach in the field of neuroinformatics and brain-computer interfaces (BCIs). Conventionally, EEG is treated as a multivariate temporal signal, where time- or frequency-domain features are extracted for representation learning. This paper investigates a simple yet effective EEG representation, i.e., microstates. Microstates represent the building blocks of brain activity patterns at a microscopic time scale. We build a universal microstate tokenizer from a large medical EEG dataset by clustering continuous EEG signals into sequences of discrete microstates. The microstate tokenizer is then adopted universally across a series of downstream tasks, including sleep staging, emotion recognition, and motor imagery classification. Experimental results show that EEG representation learning with microstates outperforms traditional time-domain and frequency-domain features under different models and across different tasks. Further analysis shows that microstates offer greater interpretability and scalability, thereby opening up applications in both cognitive neuroscience and clinical research.
@article{arxiv.2605.20182,
title = {Atoms of Thought: Universal EEG Representation Learning with Microstates},
author = {Xinyang Tian and Ruitao Liu and Ziyi Ye and Siyang Xue and Xin Wang and Xuesong Chen},
journal= {arXiv preprint arXiv:2605.20182},
year = {2026}
}
Comments
Accepted by the 3rd International Workshop on Multimodal and Responsible Affective Computing (MRAC 2025). 8 pages of main text, 23 pages total, 5 figures, 4 tables