In this paper we apply the structure of genomes as second-order Markov processes specified by the distributions of successive triplets of bases to two bioinformatics problems: identification of outliers in genome databases and read classification in metagenomics, using real coronavirus and adenovirus data.
@article{arxiv.2112.13117,
title = {Application of Markov Structure of Genomes to Outlier Identification and Read Classification},
author = {Alan F. Karr and Jason Hauzel and Adam A. Porter and Marcel Schaefer},
journal= {arXiv preprint arXiv:2112.13117},
year = {2021}
}