An Accurate Numerical Solution to the Kinetics of Breakable Filament Assembly
Abstract
Proteinaceous aggregation occurs through self-assembly-- a process not entirely understood. In a recent article [1], an analytical theory for amyloid fibril growth via secondary rather than primary nucleation was presented. Remarkably, with only a single kinetic parameter, the authors were able to unify growth characteristics for a variety of experimental data. In essence, they seem to have uncovered the underlying allometric laws governing the evolution of filament elongation simply from two coupled non-linear ordinary differential equations (ODEs) stemming from a master equation. While this work adds significantly to our understanding of filament self-assembly, it required an approximate analytical solution representation. Here, we show that the same results are found by purely numerical means once a straightforward and reliable numerical solution to the set of ODEs has been established.
Keywords
Cite
@article{arxiv.1006.3022,
title = {An Accurate Numerical Solution to the Kinetics of Breakable Filament Assembly},
author = {Barry D. Ganapol},
journal= {arXiv preprint arXiv:1006.3022},
year = {2010}
}
Comments
28 pages,8 figures