English

AI Agents in Drug Discovery

Machine Learning 2025-11-03 v1

Abstract

Artificial intelligence (AI) agents are emerging as transformative tools in drug discovery, with the ability to autonomously reason, act, and learn through complicated research workflows. Building on large language models (LLMs) coupled with perception, computation, action, and memory tools, these agentic AI systems could integrate diverse biomedical data, execute tasks, carry out experiments via robotic platforms, and iteratively refine hypotheses in closed loops. We provide a conceptual and technical overview of agentic AI architectures, ranging from ReAct and Reflection to Supervisor and Swarm systems, and illustrate their applications across key stages of drug discovery, including literature synthesis, toxicity prediction, automated protocol generation, small-molecule synthesis, drug repurposing, and end-to-end decision-making. To our knowledge, this represents the first comprehensive work to present real-world implementations and quantifiable impacts of agentic AI systems deployed in operational drug discovery settings. Early implementations demonstrate substantial gains in speed, reproducibility, and scalability, compressing workflows that once took months into hours while maintaining scientific traceability. We discuss the current challenges related to data heterogeneity, system reliability, privacy, and benchmarking, and outline future directions towards technology in support of science and translation.

Keywords

Cite

@article{arxiv.2510.27130,
  title  = {AI Agents in Drug Discovery},
  author = {Srijit Seal and Dinh Long Huynh and Moudather Chelbi and Sara Khosravi and Ankur Kumar and Mattson Thieme and Isaac Wilks and Mark Davies and Jessica Mustali and Yannick Sun and Nick Edwards and Daniil Boiko and Andrei Tyrin and Douglas W. Selinger and Ayaan Parikh and Rahul Vijayan and Shoman Kasbekar and Dylan Reid and Andreas Bender and Ola Spjuth},
  journal= {arXiv preprint arXiv:2510.27130},
  year   = {2025}
}

Comments

45 pages, 12 figures

R2 v1 2026-07-01T07:15:01.009Z