English

Active Sparse Bayesian Committee Machine Potential for Isothermal-Isobaric Molecular Dynamics Simulations

Soft Condensed Matter 2024-08-01 v3 Materials Science

Abstract

Recent advancements in machine learning potentials (MLPs) have significantly impacted the fields of chemistry, physics, and biology by enabling large-scale first-principles simulations. Among different machine learning approaches, kernel-based MLPs distinguish themselves through their ability to handle small datasets, quantify uncertainties, and minimize over-fitting. Nevertheless, their extensive computational requirements present considerable challenges. To alleviate these, sparsification methods have been developed, aiming to reduce computational scaling without compromising accuracy. In the context of isothermal and isobaric ML molecular dynamics (MD) simulations, achieving precise pressure estimation is crucial for reproducing reliable system behavior under constant pressure. Despite progress, sparse kernel MLPs struggle with precise pressure prediction. Here, we introduce a virial kernel function that significantly enhances pressure estimation accuracy of MLPs. Additionally, we propose the active sparse Bayesian committee machine (BCM) potential, an on-the-fly MLP architecture that aggregates local sparse Gaussian process regression (SGPR) MLPs. The sparse BCM potential overcomes the steep computational scaling with the kernel size, and a predefined restriction on the size of kernel allows for a fast and efficient on-the-fly training. Our advancements facilitate accurate and computationally efficient machine learning-enhanced MD (MLMD) simulations across diverse systems, including ice-liquid coexisting phases, \ce{Li10Ge(PS6)2} lithium solid electrolyte, and high-pressure liquid boron nitride.

Keywords

Cite

@article{arxiv.2402.06256,
  title  = {Active Sparse Bayesian Committee Machine Potential for Isothermal-Isobaric Molecular Dynamics Simulations},
  author = {Soohaeng Yoo Willow and Dong Geon Kim and R. Sundheep and Amir Hajibabaej and Kwang S. Kim and Chang Woo Myung},
  journal= {arXiv preprint arXiv:2402.06256},
  year   = {2024}
}

Comments

10 pages, 4 figures, 1 table, submitted to Journal

R2 v1 2026-06-28T14:43:49.721Z