Accurate dynamics from self-consistent memory in stochastic chemical reactions with small copy numbers
Abstract
We present a method that captures the fluctuations beyond mean field in chemical reactions in the regime of small copy numbers and hence large fluctuations, using self-consistently determined memory: by integrating information from the past we can systematically improve our approximation for the dynamics of chemical reactions. This memory emerges from a perturbative treatment of the effective action of the Doi-Peliti field theory for chemical reactions. By dressing only the response functions and by the self-consistent replacement of bare responses by the dressed ones, we show how a very small class of diagrams contributes to this expansion, with clear physical interpretations. From these diagrams, a large sub-class can be further resummed to infinite order, resulting in a method that is stable even for large values of the expansion parameter or equivalently large reaction rates. We demonstrate this method and its accuracy on single and multi-species binary reactions across a range of reaction constant values.
Cite
@article{arxiv.2303.00029,
title = {Accurate dynamics from self-consistent memory in stochastic chemical reactions with small copy numbers},
author = {Moshir Harsh and Peter Sollich},
journal= {arXiv preprint arXiv:2303.00029},
year = {2023}
}
Comments
35 pages, 12 figures; (Appendix: 12 pages, 3 figures)