English

About the Protein Space Vastness

Populations and Evolution 2020-08-27 v1

Abstract

An accurate estimation of the Protein Space size, in light of the factors that govern it, is a long-standing problem and of paramount importance in evolutionary biology, since it determines the nature of protein evolvability. A simple analysis will enable us to, firstly, reduce an unrealistic Protein Space size of ~10^130 sequences, for a 100-residues polypeptide chain, to ~10^9 functional proteins and, secondly, estimate a robust average-mutation rate per amino acid (x ~1.23) and infer from it, in light of the protein marginal stability, that only a fraction of the sequence will be available at any one time for a functional protein to evolve. Although this result does not solve the Protein Space vastness problem, frames it in a more rational one.

Keywords

Cite

@article{arxiv.2008.11602,
  title  = {About the Protein Space Vastness},
  author = {Jorge A. Vila},
  journal= {arXiv preprint arXiv:2008.11602},
  year   = {2020}
}

Comments

A Letter of 9 pages without figures, tables, or supporting information

R2 v1 2026-06-23T18:07:06.611Z