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A paper-based multiplexed serological test to monitor immunity against SARS-CoV-2 using machine learning

Medical Physics 2024-06-21 v1 Biological Physics Quantitative Methods

Abstract

The rapid spread of SARS-CoV-2 caused the COVID-19 pandemic and accelerated vaccine development to prevent the spread of the virus and control the disease. Given the sustained high infectivity and evolution of SARS-CoV-2, there is an ongoing interest in developing COVID-19 serology tests to monitor population-level immunity. To address this critical need, we designed a paper-based multiplexed vertical flow assay (xVFA) using five structural proteins of SARS-CoV-2, detecting IgG and IgM antibodies to monitor changes in COVID-19 immunity levels. Our platform not only tracked longitudinal immunity levels but also categorized COVID-19 immunity into three groups: protected, unprotected, and infected, based on the levels of IgG and IgM antibodies. We operated two xVFAs in parallel to detect IgG and IgM antibodies using a total of 40 uL of human serum sample in <20 min per test. After the assay, images of the paper-based sensor panel were captured using a mobile phone-based custom-designed optical reader and then processed by a neural network-based serodiagnostic algorithm. The trained serodiagnostic algorithm was blindly tested with serum samples collected before and after vaccination or infection, achieving an accuracy of 89.5%. The competitive performance of the xVFA, along with its portability, cost-effectiveness, and rapid operation, makes it a promising computational point-of-care (POC) serology test for monitoring COVID-19 immunity, aiding in timely decisions on the administration of booster vaccines and general public health policies to protect vulnerable populations.

Keywords

Cite

@article{arxiv.2402.17774,
  title  = {A paper-based multiplexed serological test to monitor immunity against SARS-CoV-2 using machine learning},
  author = {Merve Eryilmaz and Artem Goncharov and Gyeo-Re Han and Hyou-Arm Joung and Zachary S. Ballard and Rajesh Ghosh and Yijie Zhang and Dino Di Carlo and Aydogan Ozcan},
  journal= {arXiv preprint arXiv:2402.17774},
  year   = {2024}
}

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19 Pages, 4 Figures