Emerging Technologies · Computer Science
A Resistive CAM Processing-in-Storage Architecture for DNA Sequence Alignment
Roman Kaplan, Leonid Yavits, Ran Ginosar, Uri Weiser
2018-01-03
Genomics · Quantitative Biology
Embed-Search-Align: DNA Sequence Alignment using Transformer Models
Pavan Holur, K. C. Enevoldsen, Shreyas Rajesh, Lajoyce Mboning +4
2024-12-06
Genomics · Quantitative Biology
ReadsClean: a new approach to error correction of sequencing reads based on alignments clustering
Oleg Fokin, Anastasia Bakulina, Igor Seledtsov, Victor Solovyev
2019-07-31
Genomics · Quantitative Biology
mTim: Rapid and accurate transcript reconstruction from RNA-Seq data
Georg Zeller, Nico Goernitz, Andre Kahles, Jonas Behr +3
2013-09-23
Quantitative Methods · Quantitative Biology
Pairwise heuristic sequence alignment algorithm based on deep reinforcement learning
Yong Joon Song, Dong Jin Ji, Hye In Seo, Gyu Bum Han +1
2020-10-27
Genomics · Quantitative Biology
Dy-mer: An Explainable DNA Sequence Representation Scheme using Dictionary Learning
Zhiyuan Peng, Naifan Zhang, Yuanbo Tang, Yang Li
2025-12-16
Systems and Control · Electrical Eng. & Systems
FiltPIM: In-Memory Filter for DNA Sequencing
Marcel Khalifa, Rotem Ben-Hur, Ronny Ronen, Orian Leitersdorf +2
2022-06-03
Information Theory · Computer Science
Reconstruction from Substrings with Partial Overlap
Yonatan Yehezkeally, Daniella Bar-Lev, Sagi Marcovich, Eitan Yaakobi
2022-05-10
Computational Engineering, Finance, and Science · Computer Science
A Novel Method for Comparative Analysis of DNA Sequences by Ramanujan-Fourier Transform
Changchuan Yin, Xuemeng E. Yin, Jiasong Wang
2016-08-02
Emerging Technologies · Computer Science
DNA data storage, sequencing data-carrying DNA
Jasmine Quah, Omer Sella, Thomas Heinis
2022-05-12
Neural and Evolutionary Computing · Computer Science
Evolutionary Architecture Search through Grammar-Based Sequence Alignment
Adri Gómez Martín, Felix Möller, Steven McDonagh, Monica Abella +4
2025-12-05