English

A general theory of DNA-mediated and other valence-limited interactions

Soft Condensed Matter 2015-06-05 v3

Abstract

We present a general theory for predicting the interaction potentials between DNA-coated colloids, and more broadly, any particles that interact via valence-limited ligand-receptor binding. Our theory correctly incorporates the configurational and combinatorial entropic factors that play a key role in valence-limited interactions. By rigorously enforcing self-consistency, it achieves near-quantitative accuracy with respect to detailed Monte Carlo calculations. With suitable approximations and in particular geometries, our theory reduces to previous successful treatments, which are now united in a common and extensible framework. We expect our tools to be useful to other researchers investigating ligand-mediated interactions. A complete and well-documented Python implementation is freely available at http://github.com/patvarilly/DNACC .

Keywords

Cite

@article{arxiv.1205.6921,
  title  = {A general theory of DNA-mediated and other valence-limited interactions},
  author = {Patrick Varilly and Stefano Angioletti-Uberti and Bortolo M. Mognetti and Daan Frenkel},
  journal= {arXiv preprint arXiv:1205.6921},
  year   = {2015}
}

Comments

18 pages, 10 figures