English

A central limit theorem concerning uncertainty in estimates of individual admixture

Populations and Evolution 2022-08-01 v2 Statistics Theory Statistics Theory

Abstract

The concept of individual admixture (IA) assumes that the genome of individuals is composed of alleles inherited from KK ancestral populations. Each copy of each allele has the same chance qkq_k to originate from population kk, and together with the allele frequencies pp in all populations at all MM markers, comprises the admixture model. Here, we assume a supervised scheme, i.e.\ allele frequencies pp are given through a reference database of size NN, and qq is estimated via maximum likelihood for a single sample. We study laws of large numbers and central limit theorems describing effects of finiteness of both, MM and NN, on the estimate of qq. We recall results for the effect of finite MM, and provide a central limit theorem for the effect of finite NN, introduce a new way to express the uncertainty in estimates in standard barplots, give simulation results, and discuss applications in forensic genetics.

Keywords

Cite

@article{arxiv.2110.08348,
  title  = {A central limit theorem concerning uncertainty in estimates of individual admixture},
  author = {Peter Pfaffelhuber and Angelika Rohde},
  journal= {arXiv preprint arXiv:2110.08348},
  year   = {2022}
}

Comments

25 pages, 7 figures